Salk Institute
Julie A. Law
Assistant Professor
Plant Molecular and Cellular Biology Laboratory
Hearst Foundation Development Chair
Julie A. Law

Assistant Professor
Plant Molecular and Cellular Biology Laboratory
Hearst Foundation Development Chair

"The expression of genetic information within each cell must be precisely regulated for normal development, as is evident by the numerous diseases and developmental defects associated with aberrant gene expression. One layer of gene regulation involves the addition of chemical groups, or 'epigenetic modifications,' to chromatin, a combination of DNA and proteins in a cell's nucleus. I am interested in understanding how these chemical instructions are recognized and translated into stable gene expression patterns."

In plants, mammals and other eukaryotic organisms, the addition of epigenetic modifications to both DNA and histones (proteins that package and order DNA) are known to influence the expression of the underlying genes and to play critical roles in diverse biological processes, including cellular differentiation, development and the maintenance of genome integrity. However, compared to the amount of data generated over the last few decades regarding the proteins and pathways responsible for establishing, maintaining and removing epigenetic modifications, relatively little is known about how epigenetic modifications actually lead to changes in gene expression and chromatin structure.

The plant Arabidopsis thaliana provides an ideal system to study epigenetic processes. It is genetically malleable, highly amenable to whole genome analyses and, unlike mammals, is highly tolerant of dramatic changes to its epigenetic code. In addition, plants and mammals share many of the key proteins and pathways involved in establishing and maintaining epigenetic modifications, so findings in plants may be applicable to animals and humans. To gain a better understanding of the cascade of events that lead from the addition or removal of a particular epigenetic modification into a change in gene expression, Law focuses on the characterization of several newly identified families of chromatin binding proteins. By employing genetic, biochemical and genomic approaches, she aims to determine the epigenetic modifications recognized by these protein families, identify their interacting partners and determine their effects on gene expression and higher order chromatin structure. This will provide a holistic view of how epigenetic modifications control gene expression.

Such studies will begin filling a gap in our current understanding of epigenetic gene regulation and will greatly enhance our ability to understand and control the expression of existing and newly introduced genes, which has broad implications in both agriculture and gene therapy.

Lab Photo

From left to right:
Ming Zhou, Taylor Andalis, Ana Marie Palanca, Clara Bourbousse, Julie Law, Santiago Arconada Alvarez, Avital Slavin, Flora Yi, Maggie Goodson

Selected Publications

Law, J.A., Vashisht, A.A., Wohlschlegel, J.A. & Jacobsen, S.E. 2011. SHH1, a Homeodomain Protein Required for DNA Methylation, As Well As RDR2, RDM4, and Chromatin Remodeling Factors, Associate with RNA Polymerase IV. PLoS Genet 7, e1002195.

Rajakumara, E.*, Law, J.A.*, Simanshu, D.K., Voigt, P., Johnson, L.M., Reinberg, D., Patel, D.J., and Jacobsen, S.E. 2011. A dual flip out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo Genes Dev 25(2):137-152.
*The first two authors contributed equally to this publication

Greenberg, M.V., Ausin, I., Chan, S.W., Cokus, S.J., Cuperus, J.T., Feng, S., Law, J.A., Chu, C., Pellegrini, M., Carrington, J.C., and Jacobsen, S.E. 2011. Identification of genes required for de novo DNA methylation in Arabidopsis. Epigenetics 6(3).

Guo, L., Yu, Y., Law, J.A., and Zhang, X. 2010. SET DOMAIN GROUP2 is the major histone H3 lysine 4 trimethyltransferase in Arabidopsis. Proc Natl Acad Sci U S A 107(43): 18557-18562.

Law, J.A., Ausin, I., Johnson, L.M., Vashisht, A.A., Zhu, J.K., Wohlschlegel, J.A., and Jacobsen, S.E. 2010. A protein complex required for polymerase V transcripts and RNA- directed DNA methylation in Arabidopsis. Curr Biol 20(10): 951-956.

Law, J.A. and Jacobsen, S.E. 2010. Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet 11(3): 204-220.

Law, J.A. and Jacobsen, S.E. 2009. Molecular biology. Dynamic DNA methylation. Science 323(5921): 1568-1569.

Johnson, L.M., Law, J.A., Khattar, A., Henderson, I.R., and Jacobsen, S.E. 2008. SRA-domain proteins required for DRM2-mediated de novo DNA methylation. PLoS Genet 4(11): e1000280.

Law, J.A., O'Hearn, S.F., and Sollner-Webb, B. 2008. Trypanosoma brucei RNA editing protein TbMP42 (band VI) is crucial for the endonucleolytic cleavages but not the subsequent steps of U-deletion and U-insertion. RNA 14(6): 1187-1200.

Law, J.A., O'Hearn, S., and Sollner-Webb, B. 2007. In Trypanosoma brucei RNA editing, TbMP18 (band VII) is critical for editosome integrity and for both insertional and deletional cleavages. Mol Cell Biol 27(2): 777-787.

Zhelonkina, A.G., O'Hearn, S.F., Law, J.A., Cruz-Reyes, J., Huang, C.E., Alatortsev, V.S., and Sollner-Webb, B. 2006. T. brucei RNA editing: action of the U-insertional TUTase within a Udeletion cycle. RNA 12(3): 476-487.

Law, J.A., Huang, C.E., O'Hearn, S.F., and Sollner-Webb, B. 2005. In Trypanosoma brucei RNA editing, band II enables recognition specifically at each step of the U insertion cycle. Mol Cell Biol 25(7): 2785-2794.

Awards and Honors

  • Rita Allen Scholar Award (2015-2020)
  • Ruth L. Kirschstein National Research Service Award, National Institute of Health (2007-2010)
  • Howard Hughes Medical Institute Summer Fellowship, Oregon State University (2000)

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