Centro Waitt de Biofotónica Avanzada

Sejnowski, T.J. Dynamical Mechanisms for Coordinating Long-term Working Memory Based on the Precision of Spike-timing in Cortical Neurons. (2025) ArXiv.

Kelsey, M.M.G., Chongtham, A., LaCava, J., Taylor, M.S., Boeke, J.D., Gage, F.H., Seluanov, A., Gorbunova, V., Pereira, A.C., Sedivy, J.M. Retrotransposon Activation in the Aged and Alzheimer's Disease Brain Examined by Nanopore Long-read DNA Sequencing. (2025) bioRxiv. DOI: 10.64898/2025.12.12.693943

Pașca, S.P., Arlotta, P., Campbell, P., Charo, A., Evans, J.H., Farahany, N., Gage, F.H., Godfrey-Smith, P., Hyun, I., Kriegstein, A.R., Melloni, L., Ming, G.L., Moreno, J.D., Sugarman, J., Temple, S., Testa, G., Greely, H.T. The need for a global effort to attend to human neural organoid and assembloid research. (2025) Ciencia. 390(6773):574-577. DOI: 10.1126/science.aeb1510

Pinto-Duarte, A., Bogue, K., Sejnowski, T.J., Srinivasan, S. Conservation of glial density and cell-type ratios within a brain region across mammals. (2025) PNAS Nexus. 4(11):pgaf314. DOI: 10.1093/pnasnexus/pgaf314

Farsheed, A.C., Makhoul, J.T., Chew-Martinez, D., Maldonado, E., Liu, J., Yu, L.T., Gorostieta-Salas, E., Jones, J.R., Gage, F.H., Hartgerink, J.D. Omnidirectional 3D Printing of Anisotropic Nanofibrous Peptide Hydrogels. (2025) bioRxiv. DOI: 10.1101/2025.11.06.687046

Zhang, H., Nelken, I., Sharpee, T. Parsing auditory neural code into maximum-entropy packets. (2025) bioRxiv. DOI: 10.1101/2025.11.09.687481

Klug, J.R., Yan, X., Hoffman, H., Engelhardt, M.D., Osakada, F., Callaway, E.M., Jin, X. Asymmetric cortical projections to striatal direct and indirect pathways distinctly control actions. (2025) Elife. 12. DOI: 10.7554/eLife.92992

Moore, J.D., Bachmann, L.C., McElvain, L.E., Pfaff, S.L., Dulac, C. A genetically-defined population of amygdalofugal neurons promotes suckling and early postnatal growth. (2025) bioRxiv. DOI: 10.1101/2025.10.18.683193

Yao, M., Praturu, A., Sharpee, T. Multiscale Hyperbolic Embedding for Cell Hierarchies in Large-Scale Bioinformatics Data. (2025) bioRxiv. DOI: 10.1101/2025.09.29.679407

Barykina, N.V., Carey, E.M., Oliinyk, O.S., Mendonça-Gomes, J.M., de Oliveira, S., Nimmerjahn, A., Verkhusha, V.V. Synthetic multicolor antigen-stabilizable nanobody platform for intersectional labelling and functional imaging. (2025) bioRxiv. DOI: 10.1101/2025.10.27.684934

Virlogeux, A., Bollu, T., Ren, X., Palma, A.M., Goulding, M.D. The dorsal column nuclei encode and transmit the network signatures of mechanical allodynia. (2025) Cell Reports. 44(9):116248. DOI: 10.1016/j.celrep.2025.116248

Esparza-Moltó, P.B., Goswami, A.V., Bozkurt, S., Münch, C., Newman, L.E., Moyzis, A.G., Rojas, G.R., Guan, D., Jones, J.R., Gage, F.H., Shadel, G.S. Localización de enzimas glucolíticas en mitocondrias dependiente de ROS. (2025) Redox Biol. 86:103812. DOI: 10.1016/j.redox.2025.103812

Nakahira, Y., Liu, Q., Deng, X., Sejnowski, T.J., Doyle, J.C. Diversity Deconstrains Component Limitations in Sensorimotor Control. (2025) Neural Computation.:1-24 DOI: 10.1162/neco.a.24

Praturu, A., Sharpee, T.O. Distance-Based Logistic Matrix Factorization. (2025) Neural Computation.:1-14 DOI: 10.1162/neco.a.25

Calatayud, C., Fernandez-Carasa, I., Spataro, N., Mussolino, C., Richaud-Patin, Y., Faella, A., Fernández-Santiago, R., Ezquerra, M., Courtin, T., Bandres-Ciga, S., Miguez, A., Canals, J.M., Chiritoiu, M., Malhotra, V., Garrido, A., Marti, M.J., Tolosa, E., Bosch, E., Cathomen, T., Gage, F.H., Raya, A., Consiglio, A. Low-frequency genetic variants in GAK enhance Golgi function and protect against Parkinson's disease. (2025) medRxiv. DOI: 10.1101/2025.08.13.25333123

Molokanova, E., Zhou, T., Vasupal, P., Cherkas, V.P., Narute, P., Ferraz, M.S.A., Reiss, M., Almenar-Queralt, A., Chaldaiopoulou, G., de Souza, J.S., Hemati, H., Downey, F., Olajide, O.O., Thörn Perez, C., Puppo, F., Mesci, P., Pfaff, S.L., Kireev, D., Muotri, A.R., Savchenko, A. Non-genetic neuromodulation with graphene optoelectronic actuators for disease models, stem cell maturation, and biohybrid robotics. (2025) Nature Communications. 16(1):7499. DOI: 10.1038/s41467-025-62637-6

Baek, G.H., Kim, D., Son, G., Do, H., Yeon, G.B., Lee, M.J., Ji, M., Son, J.H., Ju, M., Ahn, I., Kang, C.S., Lee, H., Choi, S., Suh, J.M., Seo, J., Gage, F.H., Paik, M.J., Park, Y., Kim, D.S., Han, J. Differential effects of lithium on metabolic dysfunctions in astrocytes derived from bipolar disorder patients. (2025) Molecular Psychiatry. DOI: 10.1038/s41380-025-03176-w

Da Silva, I.I.N., Ramirez, D., Parylak, S.L., Wallace, L.A., Tucker, J.K., Erberich, J.M., Katariya, R., McDonald, A.H., Gallina, I.S., Tucker, A.L., Burgado, J., Jaeger, B.N., Barron, J.J., Pratt, J.M., Pena, M., Racha, V., Lim, C.K., Fernandes, S., Benassi, S., Randolph-Moore, L., Vadodaria, K.C., Marchetto, M.C., Allen, N.J., Gage, F.H. CK2 inhibition suppresses glial inflammation in the brain. (2025) bioRxiv. DOI: 10.1101/2025.08.05.668554

Kang, S.J., Liu, S., Kim, J.H., Kim, D.I., Oh, T.G., Peng, J., Ye, M., Lee, K.F., Evans, R.M., Goulding, M., Han, S. Thalamic CGRP neurons define a spinothalamic pathway for affective pain. (2025) Actas de la Academia Nacional de Ciencias de los Estados Unidos de América. 122(28):e2505889122. DOI: 10.1073/pnas.2505889122

Moreira, J.P.C., Carvalho, V.R., Mendes, E.M.A.M., Fallah, A., Sejnowski, T.J., Lainscsek, C., Comstock, L. An open-access EEG dataset for speech decoding: Exploring the role of articulation and coarticulation. (2025) Sci Data. 12(1):1017. DOI: 10.1038/s41597-025-05187-2

Yao, M., Nagamori, A., Campos Maçãs, S., Azim, E., Sharpee, T., Goulding, M., Golomb, D., Gatto, G. The spinal premotor network driving scratching flexor and extensor alternation. (2025) Cell Reports. 44(6):115845. DOI: 10.1016/j.celrep.2025.115845

Rowekamp, R.J., Sharpee, T.O. Computations that sustain neural feature selectivity across processing stages. (2025) PLOS Computational Biology. 21(6):e1013075. DOI: 10.1371/journal.pcbi.1013075

Liu, Y.N., Wang, Q.W., Lu, S.Y., Shen, W., Guo, C., Xing, Z., Li, C., Sun, S., Sui, S.F., Mi, S., Gage, F.H., Yao, J. Synaptotagmin-7 deficit causes insulin hypoactivity and contributes to behavioral alterations in mice. (2025) iScience. 28(5):112354. DOI: 10.1016/j.isci.2025.112354

Rusu, I., Cecere, Z.T., How, J.J., Quach, K.T., Yemini, E., Sharpee, T.O., Chalasani, S.H. A framework for analyzing C. elegans neural activity using multi-dimensional hyperbolic embedding (2025) bioRxiv. DOI: 10.1101/2021.04.09.439242

Kirk, L.M., Garcia, G.C., Hanka, D.C., Zatyko, K., Bartol, T., Sejnowski, T.J., Harris, K.M. Presynaptic vesicles supply membrane for axonal bouton enlargement during LTP. (2025) bioRxiv. DOI: 10.1101/2025.04.29.651313

Goulding, M., Bollu, T., Büschges, A. Sensory Feedback and the Dynamic Control of Movement. (2025) Annual Review of Neuroscience. DOI: 10.1146/annurev-neuro-112723-042229

Mi, X., Chen, A.B., Duarte, D., Carey, E., Taylor, C.R., Braaker, P.N., Bright, M., Almeida, R.G., Lim, J.X., Ruetten, V.M.S., Wang, Y., Wang, M., Zhang, W., Zheng, W., Reitman, M.E., Huang, Y., Wang, X., Li, L., Deng, H., Shi, S.H., Poskanzer, K.E., Lyons, D.A., Nimmerjahn, A., Ahrens, M.B., Yu, G. Fast, accurate, and versatile data analysis platform for the quantification of molecular spatiotemporal signals. (2025) Móvil. DOI: 10.1016/j.cell.2025.03.012

Bartol, T.M., Ordyan, M., Sejnowski, T.J., Rangamani, P., Kennedy, M.B. A spatial model of autophosphorylation of CaMKII predicts that the lifetime of phospho-CaMKII after induction of synaptic plasticity is greatly prolonged by CaM-trapping. (2025) Front Synaptic Neurosci. 17:1547948. DOI: 10.3389/fnsyn.2025.1547948

Tucker, J.K., Da Silva, I.I.N., Gage, F.H. Scaffold hopping and sidechain modification from a flavone scaffold lead to discovery of potent, selective CK2A2 inhibitors with favorable properties for CNS activity. (2025) Bioorganic & Medicinal Chemistry. 127:118196. DOI: 10.1016/j.bmc.2025.118196

Hur, M., Bartol, T., Rangamani, P., Sejnowski, T., Mjolsness, E. Synaptic Spine Head Morphodynamics from Graph Grammar Rules for Actin Dynamics. (2025) ArXiv.

Gage, F.H. New neurons are born in the adult human brain. (2025) Nature Medicine. DOI: 10.1038/s41591-025-03497-x

Gage, F.H. Adult Neurogenesis in the Human Dentate Gyrus. (2025) Hippocampus. 35(1):e23655. DOI: 10.1002/hipo.23655

Rungratsameetaweemana, N., Kim, R., Chotibut, T., Sejnowski, T.J. Random noise promotes slow heterogeneous synaptic dynamics important for robust working memory computation. (2025) Actas de la Academia Nacional de Ciencias de los Estados Unidos de América. 122(3):e2316745122. DOI: 10.1073/pnas.2316745122

Cassidy, R.M., Macias, A.V., Lagos, W.N., Ugorji, C., Callaway, E.M. Complementary Organization of Mouse Driver and Modulator Cortico-Thalamo-Cortical Circuits. (2025) Journal of Neuroscience. DOI: 10.1523/JNEUROSCI.1167-24.2024