玛格丽塔-贝伦斯,博士

研究教授

计算神经生物学实验室

索尔克生物研究所 出版物

所有出版物


Zeng, Q., Wang, W., Tian, W., Klein, A., Bartlett, A., Liu, H., Nery, J.R., Castanon, R.G., Osteen, J., Johnson, N.D., Ding, W., Chen, H., Altshul, J., Kenworthy, M., Valadon, C., Owens, W., Wu, Z., Amaral, M.L., Zemke, N.R., Song, Y., Báez-Becerra, C.T., Cho, S., Chen, C., Willier, J., Cao, S., Rink, J., Lee, J., Barcoma, A., Arzavala, J., Emerson, N., Lu, Y.R., Ren, B., Behrens, M.M., Ecker, J.R. Cell-type-specific transposon demethylation and TAD remodeling in aging mouse brain. (2026) 牢房. DOI: 10.1016/j.cell.2026.02.015

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Amaral, M.L., Mamde, S., Miller, M., Hou, X., Arzavala, J., Osteen, J., Johnson, N.D., Smoot, E.W., Yang, Q., Eisner, E., Zeng, Q., Báez-Becerra, C.T., Olness, J., Kern, J.C., Rink, J., Barcoma, A., Cho, S., Cao, S., Emerson, N., Lee, J., Willier, J., Loe, T., Jiao, H., Zu, S., Zhu, Q., Preissl, S., Wang, A., Ecker, J.R., Behrens, M.M., Ren, B. Single-cell epigenomics uncovers heterochromatin instability and transcription factor dysfunction during mouse brain aging. (2026) 细胞报告. 45(3):117073. DOI: 10.1016/j.celrep.2026.117073

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Zhang, W., Ding, W., Li, K., Chang, L., Klein, A., Báez-Becerra, C.T., Rink, J.A., Bartlett, A., Chen, H., Schenker, N., Johansen, N., Mollenkopf, T., Fu, Y., Yang, X., Liu, S., Seng, C., Miao, B., Liu, T., Zhu, Q., Hodge, R.D., Bakken, T.E., Lein, E.S., Hawrylycz, M., Xu, X., Behrens, M.M., Ren, B., Ecker, J.R., Wang, T., Li, D. An Integrated Single-Cell and Epigenomic Resource for Comparative Analysis of the Basal Ganglia. (2026) bioRxiv. DOI: 10.64898/2026.01.29.702575

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Wang, Z., Zu, S., Armand, E.J., Loe, T.H., Rink, J.A., Wu, W., Xie, Y., Chang, L., Zhu, C., Johnson, N.D., Lee, J., Willier, J.K., Cho, S., Cao, S., Barcoma, A.S., Emerson, N., Liu, H., Wang, K., Gibbs, Z.A., Gao, X., Xu, S., Guo, D., Tu, Z., Li, Y.E., Ecker, J.R., Behrens, M.M., Ren, B. Integrative Single-Cell Epigenomic Atlas Annotates the Regulatory Genome of the Adult Mouse Brain. (2026) bioRxiv. DOI: 10.64898/2026.02.07.704075

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Chang, L., Li, K., Xie, Y., Zhong, G., Rink, J.A., Báez-Becerra, C.T., Lie, A., Indralingam, H.S., Dong, K., Loe, T., Wang, Z., Zu, S., Kern, J.C., Zhao, Z., Boone, E., Flores, J., Monell, A., Olness, J., Barragan, C., Osgood, E., Owens, W., Schenker-Ahmed, N., Zhang, W., Liu, D., Barcoma, A.S., Willier, J.K., Knutson, K.W., Russo, K.G., Liu, J., Cho, S., Arzavala, J., Young, C.K., Sundaram, G.V., Manning, A.C., Sanchez, Y., Bikkina, A., Berry, J., Gao, X., O'Connor, C., Liem, M., Marrin, M.V., Rose, C., Alt, S.N., Zhu, C., Zemke, N.R., Ding, W., Klein, A., Fu, Y., Johansen, N., Bakken, T.E., Hodge, R.D., Keene, C.D., Lein, E.S., Li, D., Zhu, Q., Wang, T., Xu, X., Ecker, J.R., Behrens, M.M., Ren, B. Single-cell Multiome Analysis of Chromatin State and Transcriptome in the Human Basal Ganglia. (2026) bioRxiv. DOI: 10.64898/2026.02.03.703645

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Xie, Y., Chang, L., Zhong, G., Rink, J.A., Báez-Becerra, T., Armand, E., Ding, W., Li, K., Bonne, E., Lie, A., Indralingam, H.S., Dong, K., Loe, T., Huang, B., Wang, Z., Barcoma, A.S., Willier, J.K., Knutson, K.W., Liu, J., Cho, S., Cao, S., Russo, K.G., Young, C.K., Arzavala, J., Sanchez, Y., Bikkina, A., Schenker-Ahmed, N., Kern, C., Zhao, Z., Klein, A., Flores, J., Tai, C.Y., Olness, J., Monell, A., Moghadami, S., Barragan, C., Chen, C., Owens, W., O'Connor, C., Liem, M., Marrin, M.V., Rose, C., Alt, S.N., Emerson, N., Osteen, J., Lucero, J., Li, D., Hodge, R.D., Wang, T., Keene, C.D., Xu, X., Zhu, Q., Ecker, J.R., Behrens, M.M., Ren, B. Single-Cell Atlas of Transcription and Chromatin States Reveals Regulatory Programs in the Human Brain. (2026) bioRxiv. DOI: 10.64898/2026.02.02.703166

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Ding, W., Klein, A., Báez-Becerra, C.T., Rink, J.A., Bartlett, A., Zeng, Q., Wang, R., Castanon, R.G., Nery, J.R., Osgood, E., Owens, W., Petrella, A., Chen, C., Acerbo, A.S., Barcoma, A.S., Liu, J., Russo, K.G., Knutson, K.W., Young, C.K., Willier, J.K., Barragan, C., Arzavala, J., Cho, S., Altshul, J., Chan, D., Soma, E., Luo, J., Jain, M., Velazquez, S., Schenker-Ahmed, N., Sundaram, G.V., Manning, A.C., Sanchez, Y., Bikkina, A., Fu, S., O'Connor, C., Liem, M., Marrin, M.V., Rose, C., Alt, S.N., Berry, J., Kern, C., Boone, E., Tian, W., Wu, Y., Hariharan, M., Fu, Y., Xie, Y., Li, K., Chang, L., Zhang, W., Chen, H., Johansen, N., Zhao, Z., Flores, J., Tai, C.Y., Olness, J., Zhu, Q., Hodge, R.D., Bakken, T.E., Lein, E.S., Li, D., Wang, T., Xu, X., Ren, B., Behrens, M.M., Ecker, J.R. A Multimodal Single-Cell Epigenomic and 3D Genome Atlas of the Human Basal Ganglia. (2026) bioRxiv. DOI: 10.64898/2026.02.12.705594

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Berry, J.V., Tran, B.M., Wu, G., Tan, Z., Mendoza, E., Kim, M., Arat, Z., Lin, P.S.H., Valenzuela, L., Holmes, T.C., Virovka, A., Thaxton, M., Nguyen, M., Stein, S., Sigaroudi, V.R., De La Rosa, A., Gawronski, B., Silva, J., Gonzalez, L., Wright, S., Wood, K., Hui, G.K., Anousaya, D., Gangeddula, V.R., Gama, N., Gama, J., Gross, T., Bunney, B., Stein, R., Sequeira, P.A., Mamdani, F., Cartagena, P., Bunney, W.E., Lou, J., Park, H.L., Wilson, A., Brooks, H.M., Allhusen, V., Crawford, J., Knight, J.M., Ren, B., Ecker, J., Behrens, M.M., Keene, C.D., Stark, C., Head, E., Yong, W., Monuki, E., Xu, X. UC Irvine's Brain Initiative Cell Atlas Network (BICAN) Brain Procurement Program for the Center for Multiomic Human Brain Cell Atlas Project. (2025) bioRxiv. DOI: 10.64898/2025.12.23.696304

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Mukamel, E.A., Liu, H., Behrens, M.M., Ecker, J.R. Cell-type-specific enrichment of somatic aneuploidy in the mammalian brain. (2025) 神经元. 113(17):2814-2821.e2. DOI: 10.1016/j.neuron.2025.08.006

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Amaral, M.L., Mamde, S., Miller, M., Hou, X., Arzavala, J., Osteen, J., Johnson, N.D., Smoot, E.W., Yang, Q., Eisner, E., Zeng, Q., Báez-Becerra, C.T., Olness, J., Kern, J.C., Rink, J., Barcoma, A., Cho, S., Cao, S., Emerson, N., Lee, J., Willier, J., Loe, T., Jiao, H., Zu, S., Zhu, Q., Wang, A., Ecker, J.R., Behrens, M.M., Ren, B. Single-Cell Epigenomics Uncovers Heterochromatin Instability and Transcription Factor Dysfunction during Mouse Brain Aging. (2025) bioRxiv. DOI: 10.1101/2025.04.21.649585

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Lai , C., Arzavala, J., Pinto-Duarte, A., Wang, S., Li, J., Liu, H., Osteen, J., Gomez Castanon, R., Nery, J., Powell, S.B., Ecker, J.R., Mukamel, E., Behrens, M.M. Maternal Immune Activation Disrupts Epigenomic and Functional Maturation of Cortical Excitatory Neurons (2025) bioRxiv. DOI: https://doi.org/10.1101/2025.04.28.651094

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Zeng, Q., Wei, T., Klein, A., Bartlett, A., Liu, H., Nery, J.R., Castanon, R., Osteen, J., Johnson, N.D., Wang, W., Ding, W., Chen, H., Altshul, J., Kenworthy, M., Valadon, C., Owens, W., Wu, Z., Amaral, M.L., Song, Báez-Becerra, T.a.t.i.a.n.a., Cho, S., Chen, C., Willier, J., Cao, S., Rink, J., Lee, J., Barcoma, A., Arzavala, J., Emerson, N., Lu, Y.R., Ren, B., Behrens, M.a.r.g.a.r.i.t.a., Ecker, J.R. Cell-type-specific transposable element demethylation and TAD remodeling in the aging mouse brain (2025) bioRxiv. DOI: doi: https://doi.org/10.1101/2025.04.21.648266

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Chien, J.F., Liu, H., Wang, B.A., Luo, C., Bartlett, A., Castanon, R., Johnson, N.D., Nery, J.R., Osteen, J., Li, J., Altshul, J., Kenworthy, M., Valadon, C., Liem, M., Claffey, N., O'Connor, C., Seeker, L.A., Ecker, J.R., Behrens, M.M., Mukamel, E.A. Cell-type-specific effects of age and sex on human cortical neurons. (2024) 神经元. DOI: 10.1016/j.neuron.2024.05.013

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Zhou, J., Zhang, Z., Wu, M., Liu, H., Pang, Y., Bartlett, A., Peng, Z., Ding, W., Rivkin, A., Lagos, W.N., Williams, E., Lee, C.T., Miyazaki, P.A., Aldridge, A., Zeng, Q., Salinda, J.L.A., Claffey, N., Liem, M., Fitzpatrick, C., Boggeman, L., Yao, Z., Smith, K.A., Tasic, B., Altshul, J., Kenworthy, M.A., Valadon, C., Nery, J.R., Castanon, R.G., Patne, N.S., Vu, M., Rashid, M., Jacobs, M., Ito, T., Osteen, J., Emerson, N., Lee, J., Cho, S., Rink, J., Huang, H.H., Pinto-Duartec, A., Dominguez, B., Smith, J.B., O'Connor, C., Zeng, H., Chen, S., Lee, K.F., Mukamel, E.A., Jin, X., Margarita Behrens, M., Ecker, J.R., Callaway, E.M. Brain-wide correspondence of neuronal epigenomics and distant projections. (2023) 自然. 624(7991):355-365. DOI: 10.1038/s41586-023-06823-w

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Zemke, N.R., Armand, E.J., Wang, W., Lee, S., Zhou, J., Li, Y.E., Liu, H., Tian, W., Nery, J.R., Castanon, R.G., Bartlett, A., Osteen, J.K., Li, D., Zhuo, X., Xu, V., Chang, L., Dong, K., Indralingam, H.S., Rink, J.A., Xie, Y., Miller, M., Krienen, F.M., Zhang, Q., Taskin, N., Ting, J., Feng, G., McCarroll, S.A., Callaway, E.M., Wang, T., Lein, E.S., Behrens, M.M., Ecker, J.R., Ren, B. Conserved and divergent gene regulatory programs of the mammalian neocortex. (2023) 自然. 624(7991):390-402. DOI: 10.1038/s41586-023-06819-6

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Zu, S., Li, Y.E., Wang, K., Armand, E.J., Mamde, S., Amaral, M.L., Wang, Y., Chu, A., Xie, Y., Miller, M., Xu, J., Wang, Z., Zhang, K., Jia, B., Hou, X., Lin, L., Yang, Q., Lee, S., Li, B., Kuan, S., Liu, H., Zhou, J., Pinto-Duarte, A., Lucero, J., Osteen, J., Nunn, M., Smith, K.A., Tasic, B., Yao, Z., Zeng, H., Wang, Z., Shang, J., Behrens, M.M., Ecker, J.R., Wang, A., Preissl, S., Ren, B. Single-cell analysis of chromatin accessibility in the adult mouse brain. (2023) 自然. 624(7991):378-389. DOI: 10.1038/s41586-023-06824-9

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Liu, H., Zeng, Q., Zhou, J., Bartlett, A., Wang, B.A., Berube, P., Tian, W., Kenworthy, M., Altshul, J., Nery, J.R., Chen, H., Castanon, R.G., Zu, S., Li, Y.E., Lucero, J., Osteen, J.K., Pinto-Duarte, A., Lee, J., Rink, J., Cho, S., Emerson, N., Nunn, M., O'Connor, C., Wu, Z., Stoica, I., Yao, Z., Smith, K.A., Tasic, B., Luo, C., Dixon, J.R., Zeng, H., Ren, B., Behrens, M.M., Ecker, J.R. Single-cell DNA methylome and 3D multi-omic atlas of the adult mouse brain. (2023) 自然. 624(7991):366-377. DOI: 10.1038/s41586-023-06805-y

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Mukamel, E.A., Liu, H., Behrens, M.M., Ecker, J.R. Cell type-specific enrichment of somatic aneuploidy in the mammalian brain. (2023) bioRxiv. DOI: 10.1101/2023.12.18.572285

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Tian, W., Zhou, J., Bartlett, A., Zeng, Q., Liu, H., Castanon, R.G., Kenworthy, M., Altshul, J., Valadon, C., Aldridge, A., Nery, J.R., Chen, H., Xu, J., Johnson, N.D., Lucero, J., Osteen, J.K., Emerson, N., Rink, J., Lee, J., Li, Y.E., Siletti, K., Liem, M., Claffey, N., O'Connor, C., Yanny, A.M., Nyhus, J., Dee, N., Casper, T., Shapovalova, N., Hirschstein, D., Ding, S.L., Hodge, R., Levi, B.P., Keene, C.D., Linnarsson, S., Lein, E., Ren, B., Behrens, M.M., Ecker, J.R. Single-cell DNA methylation and 3D genome architecture in the human brain. Link to free full-text https://doi.org/10.1126/science.adf5357 [Pubmed] (2023) 科学. 382(6667):eadf5357. DOI: 10.1126/science.adf5357

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Li, Y.E., Preissl, S., Miller, M., Johnson, N.D., Wang, Z., Jiao, H., Zhu, C., Wang, Z., Xie, Y., Poirion, O., Kern, C., Pinto-Duarte, A., Tian, W., Siletti, K., Emerson, N., Osteen, J., Lucero, J., Lin, L., Yang, Q., Zhu, Q., Zemke, N., Espinoza, S., Yanny, A.M., Nyhus, J., Dee, N., Casper, T., Shapovalova, N., Hirschstein, D., Hodge, R.D., Linnarsson, S., Bakken, T., Levi, B., Keene, C.D., Shang, J., Lein, E., Wang, A., Behrens, M.M., Ecker, J.R., Ren, B. A comparative atlas of single-cell chromatin accessibility in the human brain. (2023) 科学. 382(6667):eadf7044. DOI: 10.1126/science.adf7044

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Xie, F., Armand, E.J., Yao, Z., Liu, H., Bartlett, A., Behrens, M.M., Li, Y.E., Lucero, J.D., Luo, C., Nery, J.R., Pinto-Duarte, A., Poirion, O.B., Preissl, S., Rivkin, A.C., Tasic, B., Zeng, H., Ren, B., Ecker, J.R., Mukamel, E.A. Robust enhancer-gene regulation identified by single-cell transcriptomes and epigenomes. (2023) Cell Genom. 3(7):100342. DOI: 10.1016/j.xgen.2023.100342

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Zemke, N.R., Armand, E.J., Wang, W., Lee, S., Zhou, J., Li, Y.E., Liu, H., Tian, W., Nery, J.R., Castanon, R.G., Bartlett, A., Osteen, J.K., Li, D., Zhuo, X., Xu, V., Miller, M., Krienen, F.M., Zhang, Q., Taskin, N., Ting, J., Feng, G., McCarroll, S.A., Callaway, E.M., Wang, T., Behrens, M.M., Lein, E.S., Ecker, J.R., Ren, B. Comparative single cell epigenomic analysis of gene regulatory programs in the rodent and primate neocortex. (2023) bioRxiv. DOI: 10.1101/2023.04.08.536119

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Li, J., Pinto-Duarte, A., Zander, M., Cuoco, M.S., Lai, C.Y., Osteen, J., Fang, L., Luo, C., Lucero, J.D., Gomez-Castanon, R., Nery, J.R., Silva-Garcia, I., Pang, Y., Sejnowski, T.J., Powell, S.B., Ecker, J.R., Mukamel, E.A., Behrens, M.M. Dnmt3a 在兴奋性神经元中的基因敲除会损害出生后突触的成熟,并增加组蛋白 H3K27me3 的抑制性修饰。. (2022) Elife. 11. DOI: 10.7554/eLife.66909

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Luo, C., Liu, H., Xie, F., Armand, E.J., Siletti, K., Bakken, T.E., Fang, R., Doyle, W.I., Stuart, T., Hodge, R.D., Hu, L., Wang, B.A., Zhang, Z., Preissl, S., Lee, D.S., Zhou, J., Niu, S.Y., Castanon, R., Bartlett, A., Rivkin, A., Wang, X., Lucero, J., Nery, J.R., Davis, D.A., Mash, D.C., Satija, R., Dixon, J.R., Linnarsson, S., Lein, E., Behrens, M.M., Ren, B., Mukamel, E.A., Ecker, J.R. Single nucleus multi-omics identifies human cortical cell regulatory genome diversity. (2022) Cell Genom. 2(3). DOI: 10.1016/j.xgen.2022.100107

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Liu, H., Zhou, J., Tian, W., Luo, C., Bartlett, A., Aldridge, A., Lucero, J., Osteen, J.K., Nery, J.R., Chen, H., Rivkin, A., Castanon, R.G., Clock, B., Li, Y.E., Hou, X., Poirion, O.B., Preissl, S., Pinto-Duarte, A., O'Connor, C., Boggeman, L., Fitzpatrick, C., Nunn, M., Mukamel, E.A., Zhang, Z., Callaway, E.M., Ren, B., Dixon, J.R., Behrens, M.M., Ecker, J.R. DNA methylation atlas of the mouse brain at single-cell resolution. (2021) 自然. 598(7879):120-128. DOI: 10.1038/s41586-020-03182-8

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Zhang, Z., Zhou, J., Tan, P., Pang, Y., Rivkin, A.C., Kirchgessner, M.A., Williams, E., Lee, C.T., Liu, H., Franklin, A.D., Miyazaki, P.A., Bartlett, A., Aldridge, A.I., Vu, M., Boggeman, L., Fitzpatrick, C., Nery, J.R., Castanon, R.G., Rashid, M., Jacobs, M.W., Ito-Cole, T., O'Connor, C., Pinto-Duartec, A., Dominguez, B., Smith, J.B., Niu, S.Y., Lee, K.F., Jin, X., Mukamel, E.A., Behrens, M.M., Ecker, J.R., Callaway, E.M. Epigenomic diversity of cortical projection neurons in the mouse brain. (2021) 自然. 598(7879):167-173. DOI: 10.1038/s41586-021-03223-w

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Li, Y.E., Preissl, S., Hou, X., Zhang, Z., Zhang, K., Qiu, Y., Poirion, O.B., Li, B., Chiou, J., Liu, H., Pinto-Duarte, A., Kubo, N., Yang, X., Fang, R., Wang, X., Han, J.Y., Lucero, J., Yan, Y., Miller, M., Kuan, S., Gorkin, D., Gaulton, K.J., Shen, Y., Nunn, M., Mukamel, E.A., Behrens, M.M., Ecker, J.R., Ren, B. An atlas of gene regulatory elements in adult mouse cerebrum. (2021) 自然. 598(7879):129-136. DOI: 10.1038/s41586-021-03604-1

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Yao, Z., Liu, H., Xie, F., Fischer, S., Adkins, R.S., Aldridge, A.I., Ament, S.A., Bartlett, A., Behrens, M.M., Van den Berge, K., Bertagnolli, D., de Bézieux, H.R., Biancalani, T., Booeshaghi, A.S., Bravo, H.C., Casper, T., Colantuoni, C., Crabtree, J., Creasy, H., Crichton, K., Crow, M., Dee, N., Dougherty, E.L., Doyle, W.I., Dudoit, S., Fang, R., Felix, V., Fong, O., Giglio, M., Goldy, J., Hawrylycz, M., Herb, B.R., Hertzano, R., Hou, X., Hu, Q., Kancherla, J., Kroll, M., Lathia, K., Li, Y.E., Lucero, J.D., Luo, C., Mahurkar, A., McMillen, D., Nadaf, N.M., Nery, J.R., Nguyen, T.N., Niu, S.Y., Ntranos, V., Orvis, J., Osteen, J.K., Pham, T., Pinto-Duarte, A., Poirion, O., Preissl, S., Purdom, E., Rimorin, C., Risso, D., Rivkin, A.C., Smith, K., Street, K., Sulc, J., Svensson, V., Tieu, M., Torkelson, A., Tung, H., Vaishnav, E.D., Vanderburg, C.R., van Velthoven, C., Wang, X., White, O.R., Huang, Z.J., Kharchenko, P.V., Pachter, L., Ngai, J., Regev, A., Tasic, B., Welch, J.D., Gillis, J., Macosko, E.Z., Ren, B., Ecker, J.R., Zeng, H., Mukamel, E.A. A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex. (2021) 自然. 598(7879):103-110. DOI: 10.1038/s41586-021-03500-8

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Bakken, T.E., Jorstad, N.L., Hu, Q., Lake, B.B., Tian, W., Kalmbach, B.E., Crow, M., Hodge, R.D., Krienen, F.M., Sorensen, S.A., Eggermont, J., Yao, Z., Aevermann, B.D., Aldridge, A.I., Bartlett, A., Bertagnolli, D., Casper, T., Castanon, R.G., Crichton, K., Daigle, T.L., Dalley, R., Dee, N., Dembrow, N., Diep, D., Ding, S.L., Dong, W., Fang, R., Fischer, S., Goldman, M., Goldy, J., Graybuck, L.T., Herb, B.R., Hou, X., Kancherla, J., Kroll, M., Lathia, K., van Lew, B., Li, Y.E., Liu, C.S., Liu, H., Lucero, J.D., Mahurkar, A., McMillen, D., Miller, J.A., Moussa, M., Nery, J.R., Nicovich, P.R., Niu, S.Y., Orvis, J., Osteen, J.K., Owen, S., Palmer, C.R., Pham, T., Plongthongkum, N., Poirion, O., Reed, N.M., Rimorin, C., Rivkin, A., Romanow, W.J., Sedeño-Cortés, A.E., Siletti, K., Somasundaram, S., Sulc, J., Tieu, M., Torkelson, A., Tung, H., Wang, X., Xie, F., Yanny, A.M., Zhang, R., Ament, S.A., Behrens, M.M., Bravo, H.C., Chun, J., Dobin, A., Gillis, J., Hertzano, R., Hof, P.R., Höllt, T., Horwitz, G.D., Keene, C.D., Kharchenko, P.V., Ko, A.L., Lelieveldt, B.P., Luo, C., Mukamel, E.A., Pinto-Duarte, A., Preissl, S., Regev, A., Ren, B., Scheuermann, R.H., Smith, K., Spain, W.J., White, O.R., Koch, C., Hawrylycz, M., Tasic, B., Macosko, E.Z., McCarroll, S.A., Ting, J.T., Zeng, H., Zhang, K., Feng, G., Ecker, J.R., Linnarsson, S., Lein, E.S. Comparative cellular analysis of motor cortex in human, marmoset and mouse. (2021) 自然. 598(7879):111-119. DOI: 10.1038/s41586-021-03465-8

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Gao, C., Liu, J., Kriebel, A.R., Preissl, S., Luo, C., Castanon, R., Sandoval, J., Rivkin, A., Nery, J.R., Behrens, M.M., Ecker, J.R., Ren, B., Welch, J.D. Iterative single-cell multi-omic integration using online learning. (2021) Nature Biotechnology. DOI: 10.1038/s41587-021-00867-x

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Zhu, C., Zhang, Y., Li, Y.E., Lucero, J., Behrens, M.M., Ren, B. Joint profiling of histone modifications and transcriptome in single cells from mouse brain. (2021) 自然方法. DOI: 10.1038/s41592-021-01060-3

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Fang, R., Preissl, S., Li, Y., Hou, X., Lucero, J., Wang, X., Motamedi, A., Shiau, A.K., Zhou, X., Xie, F., Mukamel, E.A., Zhang, K., Zhang, Y., Behrens, M.M., Ecker, J.R., Ren, B. Comprehensive analysis of single cell ATAC-seq data with SnapATAC. (2021) 自然-通讯. 12(1):1337. DOI: 10.1038/s41467-021-21583-9

+ 扩展摘要


Lavery, L.A., Ure, K., Wan, Y.W., Luo, C., Trostle, A.J., Wang, W., Jin, H., Lopez, J., Lucero, J., Durham, M.A., Castanon, R., Nery, J.R., Liu, Z., Goodell, M., Ecker, J.R., Behrens, M.M., Zoghbi, H.Y. Losing Dnmt3a dependent methylation in inhibitory neurons impairs neural function by a mechanism impacting Rett syndrome. (2020) Elife. 9. DOI: 10.7554/eLife.52981

+ 扩展摘要


Zhu, C., Yu, M., Huang, H., Juric, I., Abnousi, A., Hu, R., Lucero, J., Behrens, M.M., Hu, M., Ren, B. An ultra high-throughput method for single-cell joint analysis of open chromatin and transcriptome. (2019) 自然结构与分子生物学. 26:1063–1070. DOI: 10.1038/s41594-019-0323-x

+ 扩展摘要


Amodeo, D.A., Lai, C.Y., Hassan, O., Mukamel, E.A., Behrens, M.M., Powell, S.B. Maternal immune activation impairs cognitive flexibility and alters transcription in frontal cortex. (2019) Neurobiology of Disease. 125:211-218. DOI: 10.1016/j.nbd.2019.01.025

+ 扩展摘要


Luo, C., Rivkin, A., Zhou, J., Sandoval, J.P., Kurihara, L., Lucero, J., Castanon, R., Nery, J.R., Pinto-Duarte, A., Bui, B., Fitzpatrick, C., O'Connor, C., Ruga, S., Van Eden, M.E., Davis, D.A., Mash, D.C., Behrens, M.M., Ecker, J.R. Robust single-cell DNA methylome profiling with snmC-seq2. (2018) 自然-通讯. 9(1):3824. DOI: 10.1038/s41467-018-06355-2

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Wang, X., Pinto-Duarte, A., Behrens, M.M., Zhou, X., Sejnowski, T.J. Ketamine independently modulated power and phase-coupling of theta oscillations in Sp4 hypomorphic mice. (2018) PLOS One. 13(3):e0193446. DOI: 10.1371/journal.pone.0193446

+ 扩展摘要


Luo, C., Keown, C.L., Kurihara, L., Zhou, J., He, Y., Li, J., Castanon, R., Lucero, J., Nery, J.R., Sandoval, J.P., Bui, B., Sejnowski, T.J., Harkins, T.T., Mukamel, E.A.*, Behrens, M.M.*, Ecker, J.R.* Single-cell methylomes identify neuronal subtypes and regulatory elements in mammalian cortex. (2017) 科学. 357(6351):600-604. DOI: 10.1126/science.aan3351

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Khan, A., de Jong, L.A., Kamenski, M.E., Higa, K.K., Lucero, J.D., Young, J.W., Behrens, M.M.*, Powell, S.B.* Adolescent GBR12909 exposure induces oxidative stress, disrupts parvalbumin-positive interneurons, and leads to hyperactivity and impulsivity in adult mice. (2017) Neuroscience. 345:166-175. DOI: 10.1016/j.neuroscience.2016.11.022

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Jadi, M.P., Behrens, M.M., Sejnowski, T.J. Abnormal Gamma Oscillations in N-Methyl-D-Aspartate Receptor Hypofunction Models of Schizophrenia. (2016) 生物精神病学. 79(9):716-26. DOI: 10.1016/j.biopsych.2015.07.005

+ 扩展摘要


Wang, X., Pinto-Duarte, A., Behrens, M.M., Zhou, X., Sejnowski, T.J. Characterization of spatio-temporal epidural event-related potentials for mouse models of psychiatric disorders. (2015) 科学报告. 5:14964. DOI: 10.1038/srep14964

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Barnes, S.A., Pinto-Duarte, A., Kappe, A., Zembrzycki, A., Metzler, A., Mukamel, E.A., Lucero, J., Wang, X., Sejnowski, T.J., Markou, A.*, Behrens, M.M.* Disruption of mGluR5 in parvalbumin-positive interneurons induces core features of neurodevelopmental disorders. (2015) Molecular Psychiatry. 20(10):1161-72. DOI: 10.1038/mp.2015.113

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Powell, S.B., Khan, A., Young, J.W., Scott, C.N., Buell, M.R., Caldwell, S., Tsan, E., de Jong, L.A., Acheson, D.T., Lucero, J., Geyer, M.A., Behrens, M.M. Early Adolescent Emergence of Reversal Learning Impairments in Isolation-Reared Rats. (2015) Developmental Neuroscience. 37(3):253-62. DOI: 10.1159/000430091

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Lister, R.*, Mukamel, E.A., Nery, J.R., Urich, M., Puddifoot, C.A., Johnson, N.D., Lucero, J., Huang, Y., Dwork, A.J., Schultz, M.D., Yu, M., Tonti-Filippini, J., Heyn, H., Hu, S., Wu, J.C., Rao, A., Esteller, M., He, C., Haghighi, F.G., Sejnowski, T.J., Behrens, M.M.*, Ecker, J.R.* Global epigenomic reconfiguration during mammalian brain development. (2013) 科学. 341(6146):1237905. DOI: 10.1126/science.1237905

+ 扩展摘要


Ji, B., Wang, X., Pinto-Duarte, A., Kim, M., Caldwell, S., Young, J.W., Behrens, M.M., Sejnowski, T.J., Geyer, M.A., Zhou, X. Prolonged Ketamine Effects in Sp4 Hypomorphic Mice: Mimicking Phenotypes of Schizophrenia. (2013) PLOS One. 8(6):e66327. DOI: 10.1371/journal.pone.0066327

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Wang, X., Pinto-Duarte, A., Sejnowski, T.J., Behrens, M.M. How Nox2-containing NADPH oxidase affects cortical circuits in the NMDA receptor antagonist model of schizophrenia. (2013) Antioxidants & Redox Signaling. 18(12):1444-62. DOI: 10.1089/ars.2012.4907

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Powell, S.B., Sejnowski, T.J., Behrens, M.M. Behavioral and neurochemical consequences of cortical oxidative stress on parvalbumin-interneuron maturation in rodent models of schizophrenia. (2012) Neuropharmacology. 62(3):1322-31. DOI: 10.1016/j.neuropharm.2011.01.049

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Amitai, N., Kuczenski, R., Behrens, M.M., Markou, A. Repeated phencyclidine administration alters glutamate release and decreases GABA markers in the prefrontal cortex of rats. (2012) Neuropharmacology. 62(3):1422-31. DOI: 10.1016/j.neuropharm.2011.01.008

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Volman, V., Behrens, M.M., Sejnowski, T.J. Downregulation of parvalbumin at cortical GABA synapses reduces network gamma oscillatory activity. (2011) 神经科学杂志. 31(49):18137-48. DOI: 10.1523/JNEUROSCI.3041-11.2011

+ 扩展摘要


Loomis, W.F., Behrens, M.M., Williams, M.E., Anjard, C. Pregnenolone sulfate and cortisol induce secretion of acyl-CoA-binding protein and its conversion into endozepines from astrocytes. (2010) Journal of biological chemistry. 285(28):21359-65. DOI: 10.1074/jbc.M110.105858

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Kinney, J.W., Sanchez-Alavez, M., Barr, A.M., Criado, J.R., Crawley, J.N., Behrens, M.M., Henriksen, S.J., Bartfai, T. Impairment of memory consolidation by galanin correlates with in vivo inhibition of both LTP and CREB phosphorylation. (2009) Neurobiology of Learning and Memory. 92(3):429-38. DOI: 10.1016/j.nlm.2009.06.005

+ 扩展摘要


Behrens, M.M., Sejnowski, T.J. Does schizophrenia arise from oxidative dysregulation of parvalbumin-interneurons in the developing cortex? (2009) Neuropharmacology. 57(3):193-200. DOI: 10.1016/j.neuropharm.2009.06.002

+ 扩展摘要


Dugan, L.L., Ali, S.S., Shekhtman, G., Roberts, A.J., Lucero, J., Quick, K.L., Behrens, M.M. IL-6 mediated degeneration of forebrain GABAergic interneurons and cognitive impairment in aged mice through activation of neuronal NADPH oxidase. (2009) PLOS One. 4(5):e5518. DOI: 10.1371/journal.pone.0005518

+ 扩展摘要


Lodge, D.J., Behrens, M.M., Grace, A.A. A loss of parvalbumin-containing interneurons is associated with diminished oscillatory activity in an animal model of schizophrenia. (2009) Journal of neuroscience . 29(8):2344-54. DOI: 10.1523/JNEUROSCI.5419-08.2009

+ 扩展摘要


Behrens, M.M., Ali, S.S., Dugan, L.L. Interleukin-6 mediates the increase in NADPH-oxidase in the ketamine model of schizophrenia. (2008) 神经科学杂志. 28(51):13957-66. DOI: 10.1523/JNEUROSCI.4457-08.2008

+ 扩展摘要


Zhang, Y., Behrens, M.M., Lisman, J.E. Prolonged exposure to NMDAR antagonist suppresses inhibitory synaptic transmission in prefrontal cortex. (2008) Journal of Neurophysiology. 100(2):959-65. DOI: 10.1152/jn.00079.2008

+ 扩展摘要


Behrens, M.M.*, Ali, S.S., Dao, D.N., Lucero, J., Shekhtman, G., Quick, K.L., Dugan, L.L.* Ketamine-induced loss of phenotype of fast-spiking interneurons is mediated by NADPH-oxidase. (2007) 科学. 318(5856):1645-7. DOI: 10.1126/science.1148045

+ 扩展摘要


Ali, S.S., Xiong, C., Lucero, J., Behrens, M.M., Dugan, L.L., Quick, K.L. Gender differences in free radical homeostasis during aging: shorter-lived female C57BL6 mice have increased oxidative stress. (2006) 衰老细胞. 5(6):565-74. DOI: 10.1111/j.1474-9726.2006.00252.x

+ 扩展摘要


Davis, C.N., Tabarean, I., Gaidarova, S., Behrens, M.M., Bartfai, T. IL-1beta induces a MyD88-dependent and ceramide-mediated activation of Src in anterior hypothalamic neurons. (2006) J. Neurochem. 98(5):1379-89. DOI: 10.1111/j.1471-4159.2006.03951.x

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Davis, C.N., Mann, E., Behrens, M.M., Gaidarova, S., Rebek, M., Rebek, J., Bartfai, T. MyD88-dependent and -independent signaling by IL-1 in neurons probed by bifunctional Toll/IL-1 receptor domain/BB-loop mimetics. (2006) 美国国家科学院院刊. 103(8):2953-8. DOI: 10.1073/pnas.0510802103

+ 扩展摘要


Sanchez-Alavez, M., Tabarean, I.V., Behrens, M.M., Bartfai, T. Ceramide mediates the rapid phase of febrile response to IL-1beta. (2006) 美国国家科学院院刊. 103(8):2904-8. DOI: 10.1073/pnas.0510960103

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Kinney, J.W., Davis, C.N., Tabarean, I., Conti, B., Bartfai, T., Behrens, M.M. A specific role for NR2A-containing NMDA receptors in the maintenance of parvalbumin and GAD67 immunoreactivity in cultured interneurons. (2006) 神经科学杂志. 26(5):1604-15. DOI: 10.1523/JNEUROSCI.4722-05.2006

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Tabarean, I.V., Conti, B., Behrens, M.M., Korn, H., Bartfai (2005) Neuroscience. 135(2):433-449. DOI: https://doi.org/10.1016/j.neuroscience.2005.06.053

+ 扩展摘要


Badie-Mahdavi, H., Behrens, M.M., Rebek, J., Bartfai, T. Effect of galnon on induction of long-term potentiation in dentate gyrus of C57BL/6 mice. (2005) Neuropeptides. 39(3):249-51. DOI: 10.1016/j.npep.2004.12.010

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Badie-Mahdavi, H., Lu, X., Behrens, M.M., Bartfai, T. Role of galanin receptor 1 and galanin receptor 2 activation in synaptic plasticity associated with 3',5'-cyclic AMP response element-binding protein phosphorylation in the dentate gyrus: studies with (2005) Neuroscience. 133(2):591-604. DOI: 10.1016/j.neuroscience.2005.02.042

+ 扩展摘要


Conti, B., Sugama, S., Lucero, J., Winsky-Sommerer, R., Wirz, S.A., Maher, P., Andrews, Z., Barr, A.M., Morale, M.C., Paneda, C., Pemberton, J., Gaidarova, S., Behrens, M.M., Beal, F., Sanna, P.P., Horvath, T., Bartfai, T. Uncoupling protein 2 protects dopaminergic neurons from acute 1,2,3,6-methyl-phenyl-tetrahydropyridine toxicity. (2005) Journal of Neurochemistry. 93(2):493-501. DOI: 10.1111/j.1471-4159.2005.03052.x

+ 扩展摘要


Lu, X., Barr, A.M., Kinney, J.W., Sanna, P., Conti, B., Behrens, M.M., Bartfai, T. A role for galanin in antidepressant actions with a focus on the dorsal raphe nucleus. (2005) 美国国家科学院院刊. 102(3):874-9. DOI: 10.1073/pnas.0408891102

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Dubé, C., Vezzani, A., Behrens, M., Bartfai, T., Baram, T.Z. Interleukin-1beta contributes to the generation of experimental febrile seizures. (2005) Ann. Neurol. 57(1):152-5. DOI: 10.1002/ana.20358

+ 扩展摘要


Tabarean, I.V., Behrens, M.M., Bartfai, T., Korn, H. Prostaglandin E2-increased thermosensitivity of anterior hypothalamic neurons is associated with depressed inhibition. (2004) 美国国家科学院院刊. 101(8):2590-5. DOI: 10.1073/pnas.0308718101

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Kim, H.J., Hwang, J.J., Behrens, M.M., Snider, B.J., Choi, D.W., Koh, J.Y. TrkB mediates BDNF-induced potentiation of neuronal necrosis in cortical culture. (2003) Neurobiol. Dis. 14(1):110-9.

+ 扩展摘要


Viviani, B., Bartesaghi, S., Gardoni, F., Vezzani, A., Behrens, M.M., Bartfai, T., Binaglia, M., Corsini, E., Di Luca, M., Galli, C.L., Marinovich, M. Interleukin-1beta enhances NMDA receptor-mediated intracellular calcium increase through activation of the Src family of kinases. (2003) 神经科学杂志. 23(25):8692-700.

+ 扩展摘要


Bartfai, T., Behrens, M.M., Gaidarova, S., Pemberton, J., Shivanyuk, A., Rebek, J. A low molecular weight mimic of the Toll/IL-1 receptor/resistance domain inhibits IL-1 receptor-mediated responses. (2003) 美国国家科学院院刊. 100(13):7971-6. DOI: 10.1073/pnas.0932746100

+ 扩展摘要


Heidinger, V., Manzerra, P., Wang, X.Q., Strasser, U., Yu, S.P., Choi, D.W., Behrens, M.M. Metabotropic glutamate receptor 1-induced upregulation of NMDA receptor current: mediation through the Pyk2/Src-family kinase pathway in cortical neurons. (2002) 神经科学杂志. 22(13):5452-61. DOI: 20026565

+ 扩展摘要


Manzerra, P., Behrens, M.M., Canzoniero, L.M., Wang, X.Q., Heidinger, V., Ichinose, T., Yu, S.P., Choi, D.W. Zinc induces a Src family kinase-mediated up-regulation of NMDA receptor activity and excitotoxicity. (2001) 美国国家科学院院刊. 98(20):11055-61. DOI: 10.1073/pnas.191353598

+ 扩展摘要


Moreno-Bueno, G., Calés, C., Behrens, M.M., Fernández-Renart, M. Isolation and characterization of casein kinase I from Dictyostelium discoideum. (2000) Biochemical Journal. 349(Pt 2):527-37. DOI: 10.1042/0264-6021:3490527

+ 扩展摘要


Sheline, C.T., Behrens, M.M., Choi, D.W. Zinc-induced cortical neuronal death: contribution of energy failure attributable to loss of NAD(+) and inhibition of glycolysis. (2000) 神经科学杂志. 20(9):3139-46.

+ 扩展摘要


Behrens, M.M., Strasser, U., Heidinger, V., Lobner, D., Yu, S.P., McDonald, J.W., Won, M., Choi, D.W. Selective activation of group II mGluRs with LY354740 does not prevent neuronal excitotoxicity. (1999) Neuropharmacology. 38(10):1621-30. DOI: 10.1016/s0028-3908(99)00098-2

+ 扩展摘要


Behrens, M.M., Strasser, U., Koh, J.Y., Gwag, B.J., Choi, D.W. Prevention of neuronal apoptosis by phorbol ester-induced activation of protein kinase C: blockade of p38 mitogen-activated protein kinase. (1999) Neuroscience. 94(3):917-27. DOI: 10.1016/s0306-4522(99)00212-2

+ 扩展摘要


Behrens, M.M., Strasser, U., Lobner, D., Dugan, L.L. Neurotrophin-mediated potentiation of neuronal injury. (1999) Microsc. Res. Tech. 45(4-5):276-84. DOI: 10.1002/(SICI)1097-0029(19990515/01)45:4/5<276::AI

+ 扩展摘要


Behrens, M.M., Strasser, U., Choi, D.W. Gö 6976 is a potent inhibitor of neurotrophin-receptor intrinsic tyrosine kinase. (1999) J. Neurochem. 72(3):919-24. DOI: 10.1046/j.1471-4159.1999.0720919.x

+ 扩展摘要


García-Gallo, M., Behrens, M.M., Renart, J., Díaz-Guerra, M. Expression of N-methyl-D-aspartate receptors using vaccinia virus causes excitotoxic death in human kidney cells. (1999) J. Cell. Biochem. 72(1):135-44.

+ 扩展摘要


Strasser, U., Lobner, D., Behrens, M.M., Canzoniero, L.M., Choi, D.W. Antagonists for group I mGluRs attenuate excitotoxic neuronal death in cortical cultures. (1998) European Journal of Neuroscience. 10(9):2848-55. DOI: 10.1111/j.1460-9568.1998.00291.x

+ 扩展摘要


Martínez, J.L., Behrens, M.M., Moratilla, C., Renart, J. Oleoylanilide, a possible causative agent of toxic oil syndrome, interferes with the cytoskeleton in a neuronal cell line. (1997) Neurotoxicology and Teratology. 19(2):147-50.

+ 扩展摘要


Boland, K., Behrens, M., Choi, D., Manias, K., Perlmutter, D.H. The serpin-enzyme complex receptor recognizes soluble, nontoxic amyloid-beta peptide but not aggregated, cytotoxic amyloid-beta peptide. (1996) 生物化学杂志. 271(30):18032-44. DOI: 10.1074/jbc.271.30.18032

+ 扩展摘要


Hewett, S.J., Misko, T.P., Keeling, R.M., Behrens, M.M., Choi, D.W., Cross, A.H. Murine encephalitogenic lymphoid cells induce nitric oxide synthase in primary astrocytes. (1996) Journal of Neuroimmunology. 64(2):201-8.

+ 扩展摘要


Gwag, B.J., Koh, J.Y., Chen, M.M., Dugan, L.L., Behrens, M.M., Lobner, D., Choi, D.W. BDNF or IGF-I potentiates free radical-mediated injury in cortical cell cultures. (1995) Neuroreport. 7(1):93-6.

+ 扩展摘要


Behrens, M.M., Martínez, J.L., Moratilla, C., Renart, J. Apoptosis induced by protein kinase C inhibition in a neuroblastoma cell line. (1995) Cell Growth & Differentiation. 6(11):1375-80.

+ 扩展摘要


Franco, E., Behrens, M.M., Díaz-Guerra, M., Renart, J. Structure and expression of a polyubiquitin gene from the crustacean Artemia. (1994) Gene Expression. 4(1-2):19-28.

+ 扩展摘要


Mazón, M.J., Behrens, M.M., Morgado, E., Portillo, F. Low activity of the yeast cAMP-dependent protein kinase catalytic subunit Tpk3 is due to the poor expression of the TPK3 gene. (1993) European Journal of Biochemistry. 213(1):501-6. DOI: 10.1111/j.1432-1033.1993.tb17787.x

+ 扩展摘要


Schwandner, W.R., Jiménez, B., Schwartz, A., Weijer, C.J., Behrens, M., Mazón, M.J., Fernández-Renart, M. Chemotactic stimulation of aggregation-stage Dictyostelium cells induces rapid changes in energy metabolism, as measured by succinic thiokinase phosphorylation. (1993) Biochimica et Biophysica Acta. 1176(1-2):175-82. DOI: 10.1016/0167-4889(93)90194-t

+ 扩展摘要


Mazón, M.J., Behrens, M.M., Portillo, F., Piñón, R. cAMP- and RAS-independent nutritional regulation of plasma-membrane H+-ATPase activity in Saccharomyces cerevisiae. (1989) J. Gen. Microbiol. 135(6):1453-60. DOI: 10.1099/00221287-135-6-1453

+ 扩展摘要


Behrens, M.M., Mazón, M.J. Yeast cAMP-dependent protein kinase can be associated to the plasma membrane. (1988) 生物化学与生物物理研究通讯. 151(1):561-7. DOI: 10.1016/0006-291x(88)90631-6

+ 扩展摘要


教育

理学学士,生物化学,智利大学
理学硕士,生物化学,智利大学
博士,生物化学与分子生物学,西班牙自治大学
华盛顿大学医学院博士后奖学金


奖项与荣誉

  • 卡夫利脑与心智科学研究前沿中心创新研究基金,2018
  • NARSAD青年研究者奖,2009年
  • 丹尼尔·X·弗里德曼奖荣誉奖,2008年
  • NARSAD青年研究者奖,2004年
  • 欧洲分子生物学组织奖学金,1991年
  • 科尔德斯普林港实验室奖学金,1989年
  • 欧洲生物化学学会联合会博士前奖学金,1988年