Waitt Advanced Biophotonics Center

Publications

Salk Institute for Biological Studies - Waitt Advanced Biophotonics Center - Publications

Publications 2017


Franks TM, McCloskey A, Shokirev MN, Benner C, Rathore A, Hetzer MW.

Genes Dev. 2017 Nov 15;31(22):2222-2234. doi: 10.1101/gad.306753.117. Epub 2017 Dec 21. PMID: 29269482


Curchoe CL, Manor U.

ACS Biomater Sci Eng. 2017 Nov 13;3(11):2727-2732. doi: 10.1021/acsbiomaterials.6b00802. Epub 2017 Feb 9.

PMID: 29250592


Paquola ACM, Erwin JA, Gage FH.

Curr Opin Syst Biol. 2017 Feb;1:90-94. doi: 10.1016/j.coisb.2016.12.004. Epub 2016 Dec 9. PMID: 29226270


Koch SC, Del Barrio MG, Dalet A, Gatto G, Günther T, Zhang J, Seidler B, Saur D, Schüle R, Goulding M.

Neuron. 2017 Dec 20;96(6):1419-1431.e5. doi: 10.1016/j.neuron.2017.11.011. Epub 2017 Dec 7. PMID: 29224725


Toda T, Gage FH.

Cell Tissue Res. 2018 Sep;373(3):693-709. doi: 10.1007/s00441-017-2735-4. Epub 2017 Nov 29. Review. PMID: 29185071


Callaway EM, Garg AK.

Nature. 2017 Nov 8;551(7679):172-173. doi: 10.1038/551172a. No abstract available. 

PMID: 29120413


Jaeger BN, Parylak SL, Gage FH.

Mol Aspects Med. 2018 Jun;61:50-62. doi: 10.1016/j.mam.2017.11.003. Epub 2017 Nov 9. Review. PMID: 29117513


O'Donnell C, Gonçalves JT, Portera-Cailliau C, Sejnowski TJ.

Elife. 2017 Oct 11;6. pii: e26724. doi: 10.7554/eLife.26724.

PMID: 29019321


Sharpee TO.

Curr Opin Neurobiol. 2017 Oct;46:228-233. doi: 10.1016/j.conb.2017.09.002. Epub 2017 Sep 26. Review. PMID: 28961499


Koch SC, Acton D, Goulding M.

Annu Rev Physiol. 2018 Feb 10;80:189-217. doi: 10.1146/annurev-physiol-022516-034303. Epub 2017 Sep 27. Review.

PMID: 28961064


Shahsavani M, Pronk RJ, Falk R, Lam M, Moslem M, Linker SB, Salma J, Day K, Schuster J, Anderlid BM, Dahl N, Gage FH, Falk A.

Mol Psychiatry. 2018 Jul;23(7):1674-1684. doi: 10.1038/mp.2017.175. Epub 2017 Sep 19.

PMID: 28924182


Toda T, Hsu JY, Linker SB, Hu L, Schafer ST, Mertens J, Jacinto FV, Hetzer MW, Gage FH.

Cell Stem Cell. 2017 Nov 2;21(5):618-634.e7. doi: 10.1016/j.stem.2017.08.012. Epub 2017 Sep 14. PMID: 28919367


Wu J, Capelli P, Bouvier J, Goulding M, Arber S, Fortin G.

Nat Commun. 2017 Sep 15;8(1):544. doi: 10.1038/s41467-017-00589-2.

PMID: 28916788


Buchwalter A, Hetzer MW.

Nat Commun. 2017 Aug 30;8(1):328. doi: 10.1038/s41467-017-00322-z.

PMID: 28855503


Holter KE, Kehlet B, Devor A, Sejnowski TJ, Dale AM, Omholt SW, Ottersen OP, Nagelhus EA, Mardal KA, Pettersen KH.

Proc Natl Acad Sci U S A. 2017 Sep 12;114(37):9894-9899. doi: 10.1073/pnas.1706942114. Epub 2017 Aug 28. PMID: 28847942


Kaardal JT, Theunissen FE, Sharpee TO.

Front Comput Neurosci. 2017 Jul 31;11:68. doi: 10.3389/fncom.2017.00068. eCollection 2017. PMID: 28824408


Vadodaria KC, Stern S, Marchetto MC, Gage FH.

Cell Tissue Res. 2018 Jan;371(1):161-170. doi: 10.1007/s00441-017-2670-4. Epub 2017 Aug 15. Review. PMID: 28812143


Linker SB, Marchetto MC, Narvaiza I, Denli AM, Gage FH.

BMC Biol. 2017 Aug 11;15(1):68. doi: 10.1186/s12915-017-0409-z. Review.

PMID: 28800766


Luo C, Keown CL, Kurihara L, Zhou J, He Y, Li J, Castanon R, Lucero J, Nery JR, Sandoval JP, Bui B, Sejnowski TJ, Harkins TT, Mukamel EA, Behrens MM, Ecker JR.

Science. 2017 Aug 11;357(6351):600-604. doi: 10.1126/science.aan3351.

PMID: 28798132


Graydon CW, Manor U, Kindt KS.

Sci Rep. 2017 Aug 7;7(1):7467. doi: 10.1038/s41598-017-07940-z.

PMID: 28785118


Lainscsek C, Weyhenmeyer J, Cash SS, Sejnowski TJ.

Neural Comput. 2017 Dec;29(12):3181-3218. doi: 10.1162/neco_a_01009. Epub 2017 Aug 4. PMID: 28777720


Lin TW, Das A, Krishnan GP, Bazhenov M, Sejnowski TJ.

Neural Comput. 2017 Oct;29(10):2581-2632. doi: 10.1162/neco_a_01008. Epub 2017 Aug 4. PMID: 28777719


Atencio CA, Sharpee TO.

Neuroscience. 2017 Sep 17;359:130-141. doi: 10.1016/j.neuroscience.2017.07.003. Epub 2017 Jul 8. PMID: 28694174


Hurtado-López J, Ramirez-Moreno DF, Sejnowski TJ.

J Comput Neurosci. 2017 Oct;43(2):127-142. doi: 10.1007/s10827-017-0654-8. Epub 2017 Jun 29. PMID: 28660531


Newkirk SJ, Lee S, Grandi FC, Gaysinskaya V, Rosser JM, Vanden Berg N, Hogarth CA, Marchetto MCN, Muotri AR, Griswold MD, Ye P, Bortvin A, Gage FH, Boeke JD, An W.

Proc Natl Acad Sci U S A. 2017 Jul 11;114(28):E5635-E5644. doi: 10.1073/pnas.1701069114. Epub 2017 Jun 19. PMID: 28630288


Sharpee TO.

Neuron. 2017 Jun 7;94(5):954-960. doi: 10.1016/j.neuron.2017.04.044. Review.

PMID: 28595051


Rowekamp RJ, Sharpee TO.

Nat Commun. 2017 Jun 8;8:15739. doi: 10.1038/ncomms15739.

PMID: 28593941


Santos R, Vadodaria KC, Jaeger BN, Mei A, Lefcochilos-Fogelquist S, Mendes APD, Erikson G, Shokhirev M, Randolph-Moore L, Fredlender C, Dave S, Oefner R, Fitzpatrick C, Pena M, Barron JJ, Ku M, Denli AM, Kerman BE, Charnay P, Kelsoe JR, Marchetto MC, Gage FH.

Stem Cell Reports. 2017 Jun 6;8(6):1757-1769. doi: 10.1016/j.stemcr.2017.05.011.

PMID: 28591655


Lainscsek C, Muller LE, Sampson AL, Sejnowski TJ.

Neural Comput. 2017 Jul;29(7):2004-2020. doi: 10.1162/NECO_a_00979. Epub 2017 May 31. PMID: 28562224


Gosselin D, Skola D, Coufal NG, Holtman IR, Schlachetzki JCM, Sajti E, Jaeger BN, O'Connor C, Fitzpatrick C, Pasillas MP, Pena M, Adair A, Gonda DD, Levy ML, Ransohoff RM, Gage FH, Glass CK.

Science. 2017 Jun 23;356(6344). pii: eaal3222. doi: 10.1126/science.aal3222. Epub 2017 May 25. PMID: 28546318


Veit J, Hakim R, Jadi MP, Sejnowski TJ, Adesnik H.

Nat Neurosci. 2017 Jul;20(7):951-959. doi: 10.1038/nn.4562. Epub 2017 May 8.

PMID: 28481348


Ishii S, Torii M, Son AI, Rajendraprasad M, Morozov YM, Kawasawa YI, Salzberg AC, Fujimoto M, Brennand K, Nakai A, Mezger V, Gage FH, Rakic P, Hashimoto-Torii K.

Nat Commun. 2017 May 2;8:15157. doi: 10.1038/ncomms15157.

PMID: 28462912


Cheng L, Duan B, Huang T, Zhang Y, Chen Y, Britz O, Garcia-Campmany L, Ren X, Vong L, Lowell BB, Goulding M, Wang Y, Ma Q.

Nat Neurosci. 2017 Jun;20(6):804-814. doi: 10.1038/nn.4549. Epub 2017 Apr 24.

PMID: 28436981


Peterson DA, Sejnowski TJ.

Front Comput Neurosci. 2017 Mar 7;11:11. doi: 10.3389/fncom.2017.00011. eCollection 2017. PMID: 28326032


Kim Y, Santos R, Gage FH, Marchetto MC.

Front Cell Neurosci. 2017 Feb 14;11:30. doi: 10.3389/fncel.2017.00030. eCollection 2017. Review. PMID: 28261061


Ramsay L, Marchetto MC, Caron M, Chen SH, Busche S, Kwan T, Pastinen T, Gage FH, Bourque G.

BMC Genomics. 2017 Feb 28;18(1):214. doi: 10.1186/s12864-017-3568-y.

PMID: 28245871


Stern S, Santos R, Marchetto MC, Mendes APD, Rouleau GA, Biesmans S, Wang QW, Yao J, Charnay P, Bang AG, Alda M, Gage FH.

Mol Psychiatry. 2018 Jun;23(6):1453-1465. doi: 10.1038/mp.2016.260. Epub 2017 Feb 28.

PMID: 28242870


Flynn JR, Conn VL, Boyle KA, Hughes DI, Watanabe M, Velasquez T, Goulding MD, Callister RJ, Graham BA.

Front Neuroanat. 2017 Feb 6;11:5. doi: 10.3389/fnana.2017.00005. eCollection 2017.

PMID: 28220062


Sternfeld MJ, Hinckley CA, Moore NJ, Pankratz MT, Hilde KL, Driscoll SP, Hayashi M, Amin ND, Bonanomi D, Gifford WD, Sharma K, Goulding M, Pfaff SL.

Elife. 2017 Feb 14;6. pii: e21540. doi: 10.7554/eLife.21540.

PMID: 28195039


Tufail Y, Cook D, Fourgeaud L, Powers CJ, Merten K, Clark CL, Hoffman E, Ngo A, Sekiguchi KJ, O'Shea CC, Lemke G, Nimmerjahn A.

Neuron. 2017 Feb 8;93(3):574-586.e8. doi: 10.1016/j.neuron.2016.12.021. Epub 2017 Jan 19. PMID: 28111081


Das A, Sampson AL, Lainscsek C, Muller L, Lin W, Doyle JC, Cash SS, Halgren E, Sejnowski TJ.

Neural Comput. 2017 Mar;29(3):603-642. doi: 10.1162/NECO_a_00936. Epub 2017 Jan 17.

PMID: 28095202


Adamowicz DH, Roy S, Salmon DP, Galasko DR, Hansen LA, Masliah E, Gage FH.

J Neurosci. 2017 Feb 15;37(7):1675-1684. doi: 10.1523/JNEUROSCI.3047-16.2016. Epub 2016 Dec 30. PMID: 28039370


Juavinett AL, Nauhaus I, Garrett ME, Zhuang J, Callaway EM.

Nat Protoc. 2017 Jan;12(1):32-43. doi: 10.1038/nprot.2016.158. Epub 2016 Dec 1.

PMID: 27906169


O'Donnell C, Gonçalves JT, Whiteley N, Portera-Cailliau C, Sejnowski TJ.

Neural Comput. 2017 Jan;29(1):50-93. doi: 10.1162/NECO_a_00910. Epub 2016 Nov 21.

PMID: 27870612


Marchetto MC, Belinson H, Tian Y, Freitas BC, Fu C, Vadodaria K, Beltrao-Braga P, Trujillo CA, Mendes APD, Padmanabhan K, Nunez Y, Ou J, Ghosh H, Wright R, Brennand K, Pierce K, Eichenfield L, Pramparo T, Eyler L, Barnes CC, Courchesne E, Geschwind DH, Gage FH, Wynshaw-Boris A, Muotri AR.

Mol Psychiatry. 2017 Jun;22(6):820-835. doi: 10.1038/mp.2016.95. Epub 2016 Jul 5.

PMID: 27378147


Sarkar A, Marchetto MC, Gage FH.

Brain Res. 2017 Feb 1;1656:68-75. doi: 10.1016/j.brainres.2015.12.028. Epub 2015 Dec 23. Review. PMID: 26723567